AMARGE

QC analysis and calculation of AFFY chips expression values.

Here you could see an example of how to use the application presented next.

Data analysis

-Choose method to compute expression values


-Compressed file (zip,tar.gz or .tgz) with cel's:

Example


-What's your CDF


-Expresion values are in log2 form?


-Generate MAS5 info ?(this option require more MUCH time)


-Compute only expresion values

IMPORTANT NOTE: at the moment only 50 celfiles are allowed

Problems-Suggestions: [email protected]